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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905012.1_cds_XP_016455157.1_49113
CDS Infomation

[gene=LOC107779278] [db_xref=GeneID:107779278] [protein=calcium-dependent protein kinase 1-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016455157.1] [location=84524..>85441] [gbkey=CDS]
Sequence

ATGGGAAATAACTGTGTTCATGCAAAGTTTTCAAAGGATGGGTTCTTCAACTTATTCTTT
TGGCGGTCTCGATCACCGAATATGATCACAAATAAGAAAAAAGAAAAGGCTATTGAAGAA
CCTTCTACTGACAAACAGCCCGAACATCCTAATTCTTTTCAGAATAAACCCCCAGAATTG
GTGAAGATAGACAGAGAAGAGAGTAAGCTATCAGATACAAAAGGGTCCAAGCAGGCTATT
ATAGTGAAGGAACAGAAGACAGACTCTCAGGTAGTTAAGCCTGAGAAGATATCAGATCAT
TCGAAACCTGCAGAAGCAACGGGACCTGAAAATTTTGGCAACACAGTCCATGAAAAGGCA
AAACCAAAAGAGCCGGCAAAACCGAAGAAGCTACATCACGTCAAGAGAATGCTTAGTGCA
GGACTCCAGGTTGAGTCGGTGTTGAAAACAAAAACCGATCTTCTGAAGGAGCATTATGAT
TTGGGGGAGAAACTTGGACATGGACAATTCGGGACCACATTCCTCTGTGTTGAAAAAGCA
ACAGGGGAAAAGTATGCTTGTAAGTCTATTGCGAAGAGGAAATTATTGACACCTGAAGAT
GTGGAAGATGTAAGGAGAGAAATTCAGATATTGCATCACTTATCTGGACATCCTAACGTC
ATTTCAATAAAAGCAGCGTATGAGGATGCTGTTGCAGTTCATGTTGTGATGGAATTATGT
ACAGGGGGTGAGCTCTTCGATAGAATTGTTAAGCAGGGACATTACTCGGAGAGAAAAGTG
GCTGAGCTTGCAAGGACAATAGTTAGTGTAATAGAAGCCTGCCATTCTCTAGGAGTGTTG
CACTTGGACCTTAAGCCTGAGAATTTTCTCTTTGTCAACGAGGAAGAGGATTCACCTCTA
AAGATTATAGATTTCGGG

Peptide Sequence

PEP ID

XP_016455157.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 1-like [Nicotiana tabacum]
Sequence

MGNNCVHAKFSKDGFFNLFFWRSRSPNMITNKKKEKAIEEPSTDKQPEHPNSFQNKPPEL
VKIDREESKLSDTKGSKQAIIVKEQKTDSQVVKPEKISDHSKPAEATGPENFGNTVHEKA
KPKEPAKPKKLHHVKRMLSAGLQVESVLKTKTDLLKEHYDLGEKLGHGQFGTTFLCVEKA
TGEKYACKSIAKRKLLTPEDVEDVRREIQILHHLSGHPNVISIKAAYEDAVAVHVVMELC
TGGELFDRIVKQGHYSERKVAELARTIVSVIEACHSLGVLHLDLKPENFLFVNEEEDSPL
KIIDFGLSTFFKPGQIFSDIVGSPYYVAPEVLLKRYGQEADIWSAGVIIYILLTGVPPFW
GESEQEIFDEVLRADIDFVSDPWPNISEDAKDLVRRMLVRDPRERLTAHEVLCHPWVKID
GVAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFRMIDTDNSGQI
TFEELKVGLKRVGANLKESEIYDLMQAADVDNSGTIDYGEFIAATLHFNKIEREDHLFAA
FSYFDKDGSGYITADELQQACEEFGIGDVHLEDMIRDADQDNTYLTKDVQR

Transcript Sequence

Gene sequence data has not been registered.